Image Processing and Modeling of Brain, Spinal Cord, and Ex Vivo Diffusion MRI Data.
Fully integrated into SPM12.
ACID stands for A Comprehensive Toolbox for Image Processing and Modeling of Brain, Spinal Cord, and Ex Vivo Diffusion MRI Data. It is an academic software toolkit for pre-processing of diffusion MRI data, estimation of DTI indices, and spatial normalisation of DTI index maps, fully integrated into the batch system of SPM12.
All methods have been reviewed by domain experts and published in peer-reviewed journals. The toolbox provides the option to write the estimated diffusion tensor in the format of the DTI and Fibertools Software Package.
Note: These tools are made for users familiar with the underlying statistical, mathematical, and image processing concepts. This toolbox comes with absolutely NO WARRANTY and is not intended for any clinical or diagnostic use.
Specialized modules for diffusion MRI processing and artefact correction.
Corrects linear eddy current and motion effects in diffusion weighted images using affine whole-brain registration.
Documentation →Adaptive denoising for diffusion MRI data. Reduces noise without blurring fine structures, compatible with any diffusion model.
Documentation →Corrects susceptibility artefacts using reversed phase-encoding gradients (blip-up/blip-down acquisition).
Documentation →Estimates the diffusion tensor using OLS, WLS, or robust methods with outlier rejection.
Documentation →The ACID toolbox is freely available under the GNU General Public License (GPL v2+).
License: GNU General Public License v2 or later
No warranty. Not intended for clinical or diagnostic use.
Send questions directly to the developers and other users of the ACID toolbox.
Send an email to sympa@listserv.dfn.de
Subject: subscribe acid-toolbox [First name] [Last name]
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Contact
siawoosh.nathomohammadi@uni-luebeck.de
Citing ACID
If you use this toolbox in your research, please cite the corresponding publications for the components you used.
View citation list →